Gene: PT10G02310 (Populus trichocarpa)

Overview top

Gene Identifier
PT10G02310
Transcript Identifier
PT10G02310.1
Gene Type
Coding gene
Location
Chr10 : 3252229-3257047 : negative

Family

Gene family
HOM03M003914
(23 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Carbamoyl-phosphate synthase large chain
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.010G023100.1
idPAC:26978964

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0006807IEAGenome Projectnitrogen compound metabolic process
GO:0016036ISOPLAZA Integrative Orthologycellular response to phosphate starvationAT1G29900

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0005524IEAGenome ProjectATP binding
GO:0008716IEAGenome ProjectD-alanine-D-alanine ligase activity
GO:0046872IEAInterPrometal ion binding
GO:0004088ISOPLAZA Integrative Orthologycarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityAT1G29900

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT1G29900
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT1G29900
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G29900
GO:0005951ISOPLAZA Integrative Orthologycarbamoyl-phosphate synthase complexAT1G29900

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011607Methylglyoxal synthase-like domain
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
IPR013815ATP-grasp fold, subdomain 1
IPR006275Carbamoyl-phosphate synthase, large subunit
IPR005483Carbamoyl-phosphate synthase large subunit, CPSase domain
IPR013816ATP-grasp fold, subdomain 2
IPR005480Carbamoyl-phosphate synthetase, large subunit oligomerisation domain
IPR005481Carbamoyl-phosphate synthase, large subunit, N-terminal
IPR016185Pre-ATP-grasp domain
IPR011761ATP-grasp fold

Mapman id Description
23.1.1.1nucleotide metabolism.synthesis.pyrimidine.carbamoyl phosphate synthetase
No SignalP domains detected for this gene.