Gene: PT09G15020 (Populus trichocarpa)

Overview top

Gene Identifier
PT09G15020
Transcript Identifier
PT09G15020.1
Gene Type
Coding gene
Location
Chr09 : 11830646-11838177 : positive

Family

Gene family
HOM03M001605
(48 genes in 15 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
36 and H4 lysine-20 specific
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.009G150200.1
idPAC:26987631

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0035556IEAInterProintracellular signal transduction
GO:0010019ISOPLAZA Integrative Orthologychloroplast-nucleus signaling pathwayAT5G35210
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G35210

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0008270IEAInterProzinc ion binding
GO:0000979ISOPLAZA Integrative OrthologyRNA polymerase II core promoter sequence-specific DNA bindingAT5G35210

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT5G35210
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G35210
GO:0009707ISOPLAZA Integrative Orthologychloroplast outer membraneAT5G35210

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011011Zinc finger, FYVE/PHD-type
IPR018501DDT domain superfamily
IPR001965Zinc finger, PHD-type
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR004022DDT domain
IPR002219Protein kinase C-like, phorbol ester/diacylglycerol binding
IPR019787Zinc finger, PHD-finger
IPR019786Zinc finger, PHD-type, conserved site
IPR018500DDT domain, subgroup

Mapman id Description
27.3.67RNA.regulation of transcription.putative transcription regulator
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBDDT