Gene: PT09G05890 (Populus trichocarpa)

Overview top

Gene Identifier
PT09G05890
Transcript Identifier
PT09G05890.1
Gene Type
Coding gene
Location
Chr09 : 6144448-6151082 : positive

Family

Gene family
HOM03M001998
(41 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
DNA topoisomerase 2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.009G058900.1
idPAC:26986244

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006265IEAGenome ProjectDNA topological change
GO:0006259IEAInterProDNA metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003918IEAGenome ProjectDNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524IEAGenome ProjectATP binding
GO:0061505IEAPLAZA HomologyDNA topoisomerase II activityHOM03M001998

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694IEAGenome Projectchromosome

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminal
IPR018522DNA topoisomerase, type IIA, conserved site
IPR024946Arginine repressor C-terminal-like domain
IPR013506DNA topoisomerase, type IIA, subunit B, domain 2
IPR001241DNA topoisomerase, type IIA
IPR001154DNA topoisomerase II, eukaryotic-type
IPR013759DNA topoisomerase, type IIA, central domain
IPR020568Ribosomal protein S5 domain 2-type fold
IPR013757Type IIA DNA topoisomerase subunit A, alpha-helical domain
IPR013760DNA topoisomerase, type IIA-like domain
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR006171Toprim domain
IPR013758DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.