Gene: PT08G13240 (Populus trichocarpa)

Overview top

Gene Identifier
PT08G13240
Transcript Identifier
PT08G13240.1
Gene Type
Coding gene
Location
Chr08 : 8750543-8751259 : positive

Family

Gene family
HOM03M001476
(52 genes in 13 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
HMG-Y-related protein A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.008G132400.1
idPAC:27038597

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006334IEAGenome Projectnucleosome assembly
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M001476

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000786IEAGenome Projectnucleosome
GO:0005634IEAGenome Projectnucleus
GO:0000785IEAInterProchromatin
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M001476

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR005818Linker histone H1/H5, domain H15
IPR000116High mobility group, HMG-I/HMG-Y
IPR017956AT hook, DNA-binding motif
IPR020478AT hook-like
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.