Gene: PT08G04480 (Populus trichocarpa)

Overview top

Gene Identifier
PT08G04480
Transcript Identifier
PT08G04480.1
Gene Type
Coding gene
Location
Chr08 : 2576777-2580885 : negative

Family

Gene family
HOM03M000215
(230 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
transcription factor Y subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.008G044800.1
idPAC:27036539

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT2G38880
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000215

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003677IEAGenome ProjectDNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G38880
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03M000215

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0005634IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003958Transcription factor CBF/NF-Y/archaeal histone
IPR003956Transcription factor, NFYB/HAP3, conserved site
IPR003957Transcription factor, NFYB/HAP3 subunit
IPR009072Histone-fold

Mapman id Description
27.3.15RNA.regulation of transcription.CCAAT box binding factor family, HAP3
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT
PlantTFDBNF-YB