Gene: PT07G01330 (Populus trichocarpa)

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Gene Identifier
PT07G01330
Transcript Identifier
PT07G01330.1
Gene Type
Coding gene
Location
Chr07 : 1028748-1029059 : positive

Family

Gene family
HOM03M000276
(197 genes in 16 species)
specific family
Subfamily
ORTHO03M000012
(82 genes in 15 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Histone H4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.007G013300.1
idPAC:27016949

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006352IEAGenome ProjectDNA-dependent transcription, initiation
GO:0006334IEAGenome Projectnucleosome assembly
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G46320 AT5G59690
GO:0071824IEAPLAZA Homologyprotein-DNA complex subunit organizationHOM03M000276
GO:0071822IEAPLAZA Homologyprotein complex subunit organizationHOM03M000276
GO:0006325IEAPLAZA Homologychromatin organizationHOM03M000276
GO:0006323IEAPLAZA HomologyDNA packagingHOM03M000276
GO:0070271IEAPLAZA Homologyprotein complex biogenesisHOM03M000276
GO:0043933IEAPLAZA Homologymacromolecular complex subunit organizationHOM03M000276
GO:0031497IEAPLAZA Homologychromatin assemblyHOM03M000276
GO:0006996IEAPLAZA Homologyorganelle organizationHOM03M000276
GO:0071103IEAPLAZA HomologyDNA conformation changeHOM03M000276
GO:0065003IEAPLAZA Homologymacromolecular complex assemblyHOM03M000276
GO:0065004IEAPLAZA Homologyprotein-DNA complex assemblyHOM03M000276
GO:0006333IEAPLAZA Homologychromatin assembly or disassemblyHOM03M000276
GO:0016043IEAPLAZA Homologycellular component organizationHOM03M000276
GO:0051276IEAPLAZA Homologychromosome organizationHOM03M000276
GO:0044085IEAPLAZA Homologycellular component biogenesisHOM03M000276
GO:0022607IEAPLAZA Homologycellular component assemblyHOM03M000276
GO:0034728IEAPLAZA Homologynucleosome organizationHOM03M000276
GO:0034622IEAPLAZA Homologycellular macromolecular complex assemblyHOM03M000276
GO:0006259IEAPLAZA HomologyDNA metabolic processHOM03M000276
GO:0006461IEAPLAZA Homologyprotein complex assemblyHOM03M000276

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03M000276

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0000786IEAGenome Projectnucleosome
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT3G46320 AT5G59690
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G46320 AT5G59690
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT3G46320 AT5G59690
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT3G46320 AT5G59690
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT3G46320 AT5G59690
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT3G46320 AT5G59690
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT3G46320 AT5G59690
GO:1990104IEAPLAZA HomologyDNA bending complexHOM03M000276
GO:0032993IEAPLAZA Homologyprotein-DNA complexHOM03M000276
GO:0043228IEAPLAZA Homologynon-membrane-bounded organelleHOM03M000276
GO:0000785IEAPLAZA HomologychromatinHOM03M000276
GO:0044815IEAPLAZA HomologyDNA packaging complexHOM03M000276
GO:0005694IEAPLAZA HomologychromosomeHOM03M000276
GO:0043232IEAPLAZA Homologyintracellular non-membrane-bounded organelleHOM03M000276
GO:0044427IEAPLAZA Homologychromosomal partHOM03M000276

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR001951Histone H4
IPR019809Histone H4, conserved site
IPR007125Histone core
IPR009072Histone-fold

Mapman id Description
28.1.3DNA.synthesis/chromatin structure.histone
No SignalP domains detected for this gene.