Gene: PT06G25940 (Populus trichocarpa)

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Gene Identifier
PT06G25940
Transcript Identifier
PT06G25940.1
Gene Type
Coding gene
Location
Chr06 : 26277592-26281918 : negative

Family

Gene family
HOM03M000310
(181 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Homeobox protein knotted-1-like 3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.006G259400.1
idPAC:27006041

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009727ISOPLAZA Integrative Orthologydetection of ethylene stimulusAT4G32040
GO:0071369ISOPLAZA Integrative Orthologycellular response to ethylene stimulusAT4G32040
GO:0009722ISOPLAZA Integrative Orthologydetection of cytokinin stimulusAT5G25220
GO:0071345ISOPLAZA Integrative Orthologycellular response to cytokine stimulusAT5G25220
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT5G25220
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAInterProsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT4G32040 AT5G25220

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G25220

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001356Homeobox domain
IPR005541KNOX2
IPR009057Homeodomain-like
IPR005539ELK
IPR008422Homeobox KN domain
IPR005540KNOX1

Mapman id Description
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHB
PlantTFDBTALE