Gene: PT06G24080 (Populus trichocarpa)

Overview top

Gene Identifier
PT06G24080
Transcript Identifier
PT06G24080.1
Gene Type
Coding gene
Location
Chr06 : 24987759-24988655 : negative

Family

Gene family
HOM03M000877
(80 genes in 15 species)
specific family
Duplication type
Tandem duplicate

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Descriptions

Description (AnnoMine)
Matrix metalloproteinase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.006G240800.1
idPAC:27008061

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAGenome Projectproteolysis
GO:0008152IEAGenome Projectmetabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004222IEAGenome Projectmetalloendopeptidase activity
GO:0008270IEAGenome Projectzinc ion binding
GO:0008237IEAInterPrometallopeptidase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031012IEAGenome Projectextracellular matrix

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002477Peptidoglycan binding-like
IPR021190Peptidase M10A
IPR001818Peptidase M10, metallopeptidase
IPR021158Peptidase M10A, cysteine switch, zinc binding site
IPR006026Peptidase, metallopeptidase
IPR024079Metallopeptidase, catalytic domain

Mapman id Description
29.5.7protein.degradation.metalloprotease
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network