Gene: PT06G10600 (Populus trichocarpa)

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Gene Identifier
PT06G10600
Transcript Identifier
PT06G10600.1
Gene Type
Coding gene
Location
Chr06 : 8195914-8204662 : negative

Family

Gene family
HOM03M004924
(20 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
D-alanine
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.006G106000.1
idPAC:27006611

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009252IEAGenome Projectpeptidoglycan biosynthetic process
GO:0006023IEAPLAZA Homologyaminoglycan biosynthetic processHOM03M004924
GO:0006024IEAPLAZA Homologyglycosaminoglycan biosynthetic processHOM03M004924

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008716IEAGenome ProjectD-alanine-D-alanine ligase activity
GO:0003824IEAInterProcatalytic activity
GO:0005524IEAInterProATP binding
GO:0046872IEAInterPrometal ion binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005618IEAGenome Projectcell wall
GO:0005737IEAInterProcytoplasm

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016185Pre-ATP-grasp domain
IPR011095D-alanine--D-alanine ligase, C-terminal
IPR011761ATP-grasp fold
IPR011127D-alanine--D-alanine ligase, N-terminal domain
IPR013815ATP-grasp fold, subdomain 1
IPR013816ATP-grasp fold, subdomain 2
IPR000291D-alanine--D-alanine ligase/VANA/B/C, conserved site
IPR005905D-alanine--D-alanine ligase

Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.