Gene: PT06G03940 (Populus trichocarpa)

Overview top

Gene Identifier
PT06G03940
Transcript Identifier
PT06G03940.1
Gene Type
Coding gene
Location
Chr06 : 2792028-2800361 : positive

Family

Gene family
HOM03M003420
(26 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
gyrase subunit B
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.006G039400.1
idPAC:27005271

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006265IEAGenome ProjectDNA topological change

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003918IEAGenome ProjectDNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524IEAGenome ProjectATP binding
GO:0061505IEAPLAZA HomologyDNA topoisomerase II activityHOM03M003420

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005694IEAGenome Projectchromosome

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR018522DNA topoisomerase, type IIA, conserved site
IPR000565DNA topoisomerase, type IIA, subunit B
IPR003594Histidine kinase-like ATPase, ATP-binding domain
IPR011557DNA gyrase, subunit B
IPR001241DNA topoisomerase, type IIA
IPR002288DNA gyrase B subunit, C-terminal
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR013759DNA topoisomerase, type IIA, central domain
IPR006171Toprim domain
IPR013506DNA topoisomerase, type IIA, subunit B, domain 2
IPR020568Ribosomal protein S5 domain 2-type fold
IPR013760DNA topoisomerase, type IIA-like domain

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.