Gene: PT05G21330 (Populus trichocarpa)

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Gene Identifier
PT05G21330
Transcript Identifier
PT05G21330.1
Gene Type
Coding gene
Location
Chr05 : 22640422-22648328 : negative

Family

Gene family
HOM03M000960
(74 genes in 16 species)
specific family
Subfamily
ORTHO03M012386
(4 genes in 4 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.005G213300.1
idPAC:27031597

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0006552ISOPLAZA Integrative Orthologyleucine catabolic processAT1G03090
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000960
GO:0044711IEAPLAZA Homologysingle-organism biosynthetic processHOM03M000960
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000960
GO:0019752IEAPLAZA Homologycarboxylic acid metabolic processHOM03M000960

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0016874IEAGenome Projectligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0008716IEAGenome ProjectD-alanine-D-alanine ligase activity
GO:0004075IEAInterProbiotin carboxylase activity
GO:0046872IEAInterPrometal ion binding
GO:0004485ISOPLAZA Integrative Orthologymethylcrotonoyl-CoA carboxylase activityAT1G03090
GO:0050897ISOPLAZA Integrative Orthologycobalt ion bindingAT1G03090
GO:0016885IEAPLAZA Homologyligase activity, forming carbon-carbon bondsHOM03M000960

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT1G03090
GO:0022626ISOPLAZA Integrative Orthologycytosolic ribosomeAT1G03090

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016185Pre-ATP-grasp domain
IPR011053Single hybrid motif
IPR005479Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain
IPR011054Rudiment single hybrid motif
IPR000089Biotin/lipoyl attachment
IPR001882Biotin-binding site
IPR005481Carbamoyl-phosphate synthase, large subunit, N-terminal
IPR011764Biotin carboxylation domain
IPR005482Biotin carboxylase, C-terminal
IPR013816ATP-grasp fold, subdomain 2
IPR013815ATP-grasp fold, subdomain 1
IPR011761ATP-grasp fold

Mapman id Description
13.2.4.4amino acid metabolism.degradation.branched chain group.leucine
No SignalP domains detected for this gene.