Gene: PT05G08960 (Populus trichocarpa)

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Gene Identifier
PT05G08960
Transcript Identifier
PT05G08960.1
Gene Type
Coding gene
Location
Chr05 : 6681288-6684051 : negative

Family

Gene family
HOM03M001026
(71 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
dismutase [Fe] 2, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.005G089600.1
idPAC:27028867

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006801IEAGenome Projectsuperoxide metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0019430ISOPLAZA Integrative Orthologyremoval of superoxide radicalsAT5G23310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004784IEAGenome Projectsuperoxide dismutase activity
GO:0046872IEAGenome Projectmetal ion binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G23310
GO:0016721IEAPLAZA Homologyoxidoreductase activity, acting on superoxide radicals as acceptorHOM03M001026

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009295ISOPLAZA Integrative OrthologynucleoidAT5G23310
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G23310
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT5G23310
GO:0042644ISOPLAZA Integrative Orthologychloroplast nucleoidAT5G23310
GO:0042646ISOPLAZA Integrative Orthologyplastid nucleoidAT5G23310

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001189Manganese/iron superoxide dismutase
IPR019832Manganese/iron superoxide dismutase, C-terminal
IPR019831Manganese/iron superoxide dismutase, N-terminal
IPR019833Manganese/iron superoxide dismutase, binding site

Mapman id Description
21.6redox.dismutases and catalases
No SignalP domains detected for this gene.