Gene: PT04G13290 (Populus trichocarpa)

Overview top

Gene Identifier
PT04G13290
Transcript Identifier
PT04G13290.1
Gene Type
Coding gene
Location
Chr04 : 15275227-15286516 : positive

Family

Gene family
HOM03M000391
(156 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Cullin-4
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.004G132900.1
idPAC:26991528

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEAGenome Projectubiquitin-dependent protein catabolic process
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03M000391
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03M000391
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03M000391
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03M000391
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03M000391
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03M000391

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0031625IEAGenome Projectubiquitin protein ligase binding
GO:0044389IEAPLAZA Homologysmall conjugating protein ligase bindingHOM03M000391
GO:0019899IEAPLAZA Homologyenzyme bindingHOM03M000391

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031461IEAGenome Projectcullin-RING ubiquitin ligase complex
GO:0000151IEAPLAZA Homologyubiquitin ligase complexHOM03M000391

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR019559Cullin protein, neddylation domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR016158Cullin homology
IPR016157Cullin, conserved site
IPR016159Cullin repeat-like-containing domain
IPR001373Cullin, N-terminal

Mapman id Description
29.5.11.4.3.3protein.degradation.ubiquitin.E3.SCF.cullin
No SignalP domains detected for this gene.