Gene: PT04G06600 (Populus trichocarpa)

Overview top

Gene Identifier
PT04G06600
Transcript Identifier
PT04G06600.1
Gene Type
Coding gene
Location
Chr04 : 5545368-5548420 : positive

Family

Gene family
HOM03M003226
(27 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
beta type-7
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.004G066000.1
idPAC:26991686

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0051603IEAGenome Projectproteolysis involved in cellular protein catabolic process
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT3G27430

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004298IEAGenome Projectthreonine-type endopeptidase activity
GO:0004175IEAInterProendopeptidase activity
GO:0070003IEAPLAZA Homologythreonine-type peptidase activityHOM03M003226

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005839IEAGenome Projectproteasome core complex
GO:0000502ISOPLAZA Integrative Orthologyproteasome complexAT3G27430

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000243Peptidase T1A, proteasome beta-subunit
IPR023333Proteasome B-type subunit
IPR001353Proteasome, subunit alpha/beta
IPR016050Proteasome beta-type subunit, conserved site

Mapman id Description
29.5.11.20protein.degradation.ubiquitin.proteasom
No SignalP domains detected for this gene.