Gene: PT04G00760 (Populus trichocarpa)

Overview top

Gene Identifier
PT04G00760
Transcript Identifier
PT04G00760.1
Gene Type
Coding gene
Location
Chr04 : 489300-493440 : positive

Family

Gene family
HOM03M000828
(83 genes in 16 species)
specific family
Subfamily
ORTHO03M000131
(27 genes in 13 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Aspartic proteinase oryzasin-1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.004G007600.1
idPAC:26992015

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006508IEAGenome Projectproteolysis
GO:0006629IEAGenome Projectlipid metabolic process
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G04460
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT1G11910

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004190IEAGenome Projectaspartic-type endopeptidase activity
GO:0004175ISOPLAZA Integrative Orthologyendopeptidase activityAT1G11910
GO:0070001IEAPLAZA Homologyaspartic-type peptidase activityHOM03M000828

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009506ISOPLAZA Integrative OrthologyplasmodesmaAT1G11910
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G11910
GO:0005773ISOPLAZA Integrative OrthologyvacuoleAT1G11910 AT1G62290

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR008139Saposin B
IPR021109Aspartic peptidase domain
IPR001461Aspartic peptidase
IPR007856Saposin-like type B, 1
IPR001969Aspartic peptidase, active site
IPR008138Saposin-like type B, 2
IPR011001Saposin-like

Mapman id Description
29.5.4protein.degradation.aspartate protease
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network