Gene: PT03G20230 (Populus trichocarpa)

Overview top

Gene Identifier
PT03G20230
Transcript Identifier
PT03G20230.1
Gene Type
Coding gene
Location
Chr03 : 20404254-20411575 : negative

Family

Gene family
HOM03M003508
(25 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
junction endonuclease MUS81
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.003G202300.1
idPAC:26999059

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006259IEAGenome ProjectDNA metabolic process
GO:0006281ISOPLAZA Integrative OrthologyDNA repairAT4G30870
GO:0006312ISOPLAZA Integrative Orthologymitotic recombinationAT4G30870
GO:0006974ISOPLAZA Integrative Orthologycellular response to DNA damage stimulusAT4G30870
GO:0051026ISOPLAZA Integrative Orthologychiasma assemblyAT4G30870
GO:0000724ISOPLAZA Integrative Orthologydouble-strand break repair via homologous recombinationAT4G30870

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0004518IEAGenome Projectnuclease activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000794ISOPLAZA Integrative Orthologycondensed nuclear chromosomeAT4G30870

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020819DNA repair nuclease, XPF-type/Helicase
IPR006166ERCC4 domain
IPR011335Restriction endonuclease type II-like

Mapman id Description
28.1DNA.synthesis/chromatin structure
No SignalP domains detected for this gene.