Gene: PT02G20220 (Populus trichocarpa)

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Gene Identifier
PT02G20220
Transcript Identifier
PT02G20220.1
Gene Type
Coding gene
Location
Chr02 : 16389723-16391749 : negative

Family

Gene family
HOM03M000089
(508 genes in 14 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
Exopolygalacturonase clone GBGE184
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.002G202200.1
idPAC:27024161

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03M000089

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004650IEAGenome Projectpolygalacturonase activity
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03M000089
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03M000089
GO:0004553IEAPLAZA Homologyhydrolase activity, hydrolyzing O-glycosyl compoundsHOM03M000089

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011050Pectin lyase fold/virulence factor
IPR006626Parallel beta-helix repeat
IPR012334Pectin lyase fold
IPR000743Glycoside hydrolase, family 28

Mapman id Description
10.6.3cell wall.degradation.pectate lyases and polygalacturonases
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network