Gene: PT02G07470 (Populus trichocarpa)

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Gene Identifier
PT02G07470
Transcript Identifier
PT02G07470.1
Gene Type
Coding gene
Location
Chr02 : 5158496-5160785 : negative

Family

Gene family
HOM03M002886
(30 genes in 15 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
F-box protein SKP2A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.002G074700.1
idPAC:27024688

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0031146ISOPLAZA Integrative OrthologySCF-dependent proteasomal ubiquitin-dependent protein catabolic processAT1G21410
GO:0010311ISOPLAZA Integrative Orthologylateral root formationAT1G21410
GO:0051781ISOPLAZA Integrative Orthologypositive regulation of cell divisionAT1G21410
GO:0016567ISOPLAZA Integrative Orthologyprotein ubiquitinationAT1G21410
GO:0071365ISOPLAZA Integrative Orthologycellular response to auxin stimulusAT1G21410
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G77000
GO:0010286ISOPLAZA Integrative Orthologyheat acclimationAT1G77000
GO:0051603ISOPLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic processAT1G77000
GO:1901332ISOPLAZA Integrative Orthologynegative regulation of lateral root developmentAT1G77000

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0004842ISOPLAZA Integrative Orthologyubiquitin-protein ligase activityAT1G21410

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0019005ISOPLAZA Integrative OrthologySCF ubiquitin ligase complexAT1G21410
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G21410

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006553Leucine-rich repeat, cysteine-containing subtype
IPR001810F-box domain

Mapman id Description
29.5.11.4.3.2protein.degradation.ubiquitin.E3.SCF.FBOX
No SignalP domains detected for this gene.