Gene: PT02G00400 (Populus trichocarpa)

Overview top

Gene Identifier
PT02G00400
Transcript Identifier
PT02G00400.1
Gene Type
Coding gene
Location
Chr02 : 240519-242787 : negative

Family

Gene family
HOM03M001461
(52 genes in 14 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
3-hydroxy-3-methylglutaryl-coenzyme A reductase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.002G004000.1
idPAC:27023708

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0015936IEAGenome Projectcoenzyme A metabolic process
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0008299IEAInterProisoprenoid biosynthetic process
GO:0016126ISOPLAZA Integrative Orthologysterol biosynthetic processAT1G76490
GO:0019287ISOPLAZA Integrative Orthologyisopentenyl diphosphate biosynthetic process, mevalonate pathwayAT1G76490
GO:0060964ISOPLAZA Integrative Orthologyregulation of gene silencing by miRNAAT1G76490
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT1G76490
GO:0048235ISOPLAZA Integrative Orthologypollen sperm cell differentiationAT1G76490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004420IEAGenome Projecthydroxymethylglutaryl-CoA reductase (NADPH) activity
GO:0050662IEAGenome Projectcoenzyme binding
GO:0050661IEAInterProNADP binding
GO:0016616IEAInterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT1G76490
GO:0042282ISOPLAZA Integrative Orthologyhydroxymethylglutaryl-CoA reductase activityAT1G76490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0016021IEAInterProintegral to membrane
GO:0005777ISOPLAZA Integrative OrthologyperoxisomeAT1G76490
GO:0009536ISOPLAZA Integrative OrthologyplastidAT1G76490
GO:0005789ISOPLAZA Integrative Orthologyendoplasmic reticulum membraneAT1G76490
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G76490
GO:0005783ISOPLAZA Integrative Orthologyendoplasmic reticulumAT1G76490

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002202Hydroxymethylglutaryl-CoA reductase, class I/II
IPR009023Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding
IPR023074Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain
IPR009029Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding
IPR023076Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site
IPR023282Hydroxymethylglutaryl-CoA reductase, N-terminal
IPR004554Hydroxymethylglutaryl-CoA reductase, eukaryotic/arcaheal type

Mapman id Description
16.1.2.3secondary metabolism.isoprenoids.mevalonate pathway.HMG-CoA reductase
No SignalP domains detected for this gene.