Gene: PT00G15500 (Populus trichocarpa)

Overview top

Gene Identifier
PT00G15500
Transcript Identifier
PT00G15500.1
Gene Type
Coding gene
Location
scaffold_87 : 89732-93068 : positive

Family

Gene family
HOM03M003079
(28 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.T079800.1
idPAC:27035711

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009058IEAGenome Projectbiosynthetic process
GO:0009793ISOPLAZA Integrative Orthologyembryo development ending in seed dormancyAT2G22250
GO:0009095ISOPLAZA Integrative Orthologyaromatic amino acid family biosynthetic process, prephenate pathwayAT2G22250

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016740IEAGenome Projecttransferase activity
GO:0030170IEAGenome Projectpyridoxal phosphate binding
GO:0016769IEAGenome Projecttransferase activity, transferring nitrogenous groups
GO:0003824IEAInterProcatalytic activity
GO:0033853ISOPLAZA Integrative Orthologyaspartate-prephenate aminotransferase activityAT2G22250
GO:0033854ISOPLAZA Integrative Orthologyglutamate-prephenate aminotransferase activityAT2G22250
GO:0004069ISOPLAZA Integrative OrthologyL-aspartate:2-oxoglutarate aminotransferase activityAT2G22250

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT2G22250
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT2G22250

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004838Aminotransferases, class-I, pyridoxal-phosphate-binding site
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015424Pyridoxal phosphate-dependent transferase
IPR004839Aminotransferase, class I/classII
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2

Mapman id Description
13.1.1.2.1amino acid metabolism.synthesis.central amino acid metabolism.aspartate.aspartate aminotransferase
No SignalP domains detected for this gene.