Gene: PT00G13940 (Populus trichocarpa)
Overview 
- Gene Identifier
- PT00G13940
- Transcript Identifier
- PT00G13940.1
- Gene Type
- Coding gene
- Location
- scaffold_32 : 160531-166758 : negative
Family
- Gene family
- Duplication type
- Block duplicate
Descriptions
- Description (AnnoMine)
-
CoA dehydrogenase family member 11
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Potri.T030600.1 |
id | PAC:27027187 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0055114 | IEA | Genome Project | oxidation-reduction process | |
GO:0008152 | IEA | InterPro | metabolic process | |
GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT3G06810 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0016627 | IEA | Genome Project | oxidoreductase activity, acting on the CH-CH group of donors | |
GO:0003995 | IEA | Genome Project | acyl-CoA dehydrogenase activity | |
GO:0016491 | IEA | Genome Project | oxidoreductase activity | |
GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
GO:0016772 | IEA | InterPro | transferase activity, transferring phosphorus-containing groups |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR011009 | Protein kinase-like domain |
IPR009075 | Acyl-CoA dehydrogenase/oxidase C-terminal |
IPR006091 | Acyl-CoA oxidase/dehydrogenase, central domain |
IPR013786 | Acyl-CoA dehydrogenase/oxidase, N-terminal |
IPR002575 | Aminoglycoside phosphotransferase |
IPR009100 | Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain |
Mapman id | Description |
---|---|
11.9.4.2 | lipid metabolism.lipid degradation.beta-oxidation.acyl CoA DH |
No SignalP domains detected for this gene.