Gene: PT00G12970 (Populus trichocarpa)

Overview top

Gene Identifier
PT00G12970
Transcript Identifier
PT00G12970.1
Gene Type
Coding gene
Location
scaffold_36 : 236230-239379 : positive

Family

Gene family
HOM03M000936
(76 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
phosphoinositide-interacting protein 3
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.T034900.1
idPAC:27027060

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006914ISOPLAZA Integrative OrthologyautophagyAT3G62770
GO:0010150ISOPLAZA Integrative Orthologyleaf senescenceAT3G62770
GO:0042594ISOPLAZA Integrative Orthologyresponse to starvationAT3G62770
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT3G62770
GO:0006970ISOPLAZA Integrative Orthologyresponse to osmotic stressAT3G62770
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G62770
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT3G62770
GO:0048102ISOPLAZA Integrative Orthologyautophagic cell deathAT3G62770
GO:0050832ISOPLAZA Integrative Orthologydefense response to fungusAT3G62770

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT3G62770
GO:0005829ISOPLAZA Integrative OrthologycytosolAT3G62770

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017986WD40-repeat-containing domain
IPR001680WD40 repeat
IPR015943WD40/YVTN repeat-like-containing domain

Mapman id Description
29.5.2protein.degradation.autophagy
No SignalP domains detected for this gene.