Gene: PT00G08170 (Populus trichocarpa)
Overview 
- Gene Identifier
- PT00G08170
- Transcript Identifier
- PT00G08170.1
- Gene Type
- Coding gene
- Location
- scaffold_81 : 46859-48367 : negative
Family
- Gene family
Descriptions
- Description (AnnoMine)
-
Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Potri.T074400.1 |
id | PAC:27008768 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009688 | ISO | PLAZA Integrative Orthology | abscisic acid biosynthetic process | AT1G30100 |
GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G30100 |
GO:0010162 | ISO | PLAZA Integrative Orthology | seed dormancy process | AT1G30100 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0045549 | ISO | PLAZA Integrative Orthology | 9-cis-epoxycarotenoid dioxygenase activity | AT1G30100 |
GO:0016702 | IEA | PLAZA Homology | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | HOM03M000349 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009579 | ISO | PLAZA Integrative Orthology | thylakoid | AT1G30100 |
GO:0009536 | IEA | PLAZA Homology | plastid | HOM03M000349 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
17.1.1.1.10 | hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase |
No SignalP domains detected for this gene.