Gene: PT00G08170 (Populus trichocarpa)

Overview top

Gene Identifier
PT00G08170
Transcript Identifier
PT00G08170.1
Gene Type
Coding gene
Location
scaffold_81 : 46859-48367 : negative

Family

Gene family
HOM03M000349
(169 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.T074400.1
idPAC:27008768

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009688ISOPLAZA Integrative Orthologyabscisic acid biosynthetic processAT1G30100
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT1G30100
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT1G30100

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0045549ISOPLAZA Integrative Orthology9-cis-epoxycarotenoid dioxygenase activityAT1G30100
GO:0016702IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenHOM03M000349

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009579ISOPLAZA Integrative OrthologythylakoidAT1G30100
GO:0009536IEAPLAZA HomologyplastidHOM03M000349

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004294Carotenoid oxygenase

Mapman id Description
17.1.1.1.10hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase
No SignalP domains detected for this gene.