Gene: PT00G00330 (Populus trichocarpa)

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Gene Identifier
PT00G00330
Transcript Identifier
PT00G00330.1
Gene Type
Coding gene
Location
scaffold_139 : 70575-72955 : negative

Family

Gene family
HOM03M000170
(282 genes in 16 species)
specific family
Subfamily
ORTHO03M007793
(5 genes in 5 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Probable transcription factor GLK2
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPotri.T098900.1
idPAC:26983149

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010380ISOPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT5G44190 AT2G20570
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT5G44190 AT2G20570
GO:0009658ISOPLAZA Integrative Orthologychloroplast organizationAT5G44190 AT2G20570
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G44190 AT2G20570
GO:0007165ISOPLAZA Integrative Orthologysignal transductionAT2G20570
GO:0000160IEAPLAZA Homologyphosphorelay signal transduction systemHOM03M000170
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000170
GO:0006355IEAPLAZA Homologyregulation of transcription, DNA-dependentHOM03M000170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0003682IEAInterProchromatin binding
GO:0044212ISOPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT2G20570
GO:0003700ISOPLAZA Integrative Orthologysequence-specific DNA binding transcription factor activityAT2G20570
GO:0060089IEAPLAZA Homologymolecular transducer activityHOM03M000170
GO:0000156IEAPLAZA Homologyphosphorelay response regulator activityHOM03M000170
GO:0004871IEAPLAZA Homologysignal transducer activityHOM03M000170

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017930Myb domain
IPR009057Homeodomain-like
IPR006447Myb domain, plants
IPR001005SANT/Myb domain

Mapman id Description
27.3.20RNA.regulation of transcription.G2-like transcription factor family, GARP
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBG2-like
PlantTFDBG2-like