Gene: PP00526G00060 (Physcomitrella patens)

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Gene Identifier
PP00526G00060
Transcript Identifier
PP00526G00060.1
Gene Type
Coding gene
Location
scaffold_526 : 31530-36446 : positive

Family

Gene family
HOM03M000562
(118 genes in 16 species)
specific family
Subfamily
ORTHO03M002113
(9 genes in 8 species)
specific family

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Descriptions

Description (AnnoMine)
amylase type A isozyme
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s526_11V6.2
idPAC:18070813

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004556IEAGenome Projectalpha-amylase activity
GO:0005509IEAGenome Projectcalcium ion binding
GO:0043169IEAGenome Projectcation binding
GO:0003824IEAGenome Projectcatalytic activity
GO:0016160IEAPLAZA Homologyamylase activityHOM03M000562

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISOPLAZA Integrative Orthologyextracellular regionAT1G76130

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017853Glycoside hydrolase, superfamily
IPR006589Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR012850Alpha-amylase, C-terminal beta-sheet
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR013781Glycoside hydrolase, catalytic domain
IPR006047Glycosyl hydrolase, family 13, catalytic domain
IPR006046Alpha amylase
IPR015902Glycoside hydrolase, family 13

Mapman id Description
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage
No SignalP domains detected for this gene.