Gene: PP00405G00180 (Physcomitrella patens)

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Gene Identifier
PP00405G00180
Transcript Identifier
PP00405G00180.1
Gene Type
Coding gene
Location
scaffold_405 : 243041-244588 : positive

Family

Gene family
HOM03M003012
(29 genes in 16 species)
specific family
Subfamily
ORTHO03M004040
(7 genes in 6 species)
specific family

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Descriptions

Description (AnnoMine)
Probable diaminopimelate decarboxylase, chloroplastic
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s405_31V6.1
idPAC:18065340

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009089IEAInterProlysine biosynthetic process via diaminopimelate
GO:0009085IEAPLAZA Homologylysine biosynthetic processHOM03M003012
GO:0046451IEAPLAZA Homologydiaminopimelate metabolic processHOM03M003012

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0008836IEAInterProdiaminopimelate decarboxylase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G14390

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR022657Orn/DAP/Arg decarboxylase 2, conserved site
IPR022644Orn/DAP/Arg decarboxylase 2, N-terminal
IPR000183Ornithine/DAP/Arg decarboxylase
IPR002986Diaminopimelate decarboxylase, LysA
IPR022643Orn/DAP/Arg decarboxylase 2, C-terminal
IPR009006Alanine racemase/group IV decarboxylase, C-terminal
IPR022653Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site

Mapman id Description
13.1.3.5.5amino acid metabolism.synthesis.aspartate family.lysine.diaminopimelate decarboxylase
No SignalP domains detected for this gene.