Gene: PP00370G00320 (Physcomitrella patens)

Overview top

Gene Identifier
PP00370G00320
Transcript Identifier
PP00370G00320.1
Gene Type
Coding gene
Location
scaffold_370 : 316468-319632 : positive

Family

Gene family
HOM03M000450
(140 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
transcription factor Y subunit C
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s370_63V6.1
idPAC:18042012

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000450

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0046982IEAInterProprotein heterodimerization activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0016602IEAInterProCCAAT-binding factor complex
GO:0005667IEAPLAZA Homologytranscription factor complexHOM03M000450
GO:0044798IEAPLAZA Homologynuclear transcription factor complexHOM03M000450

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003958Transcription factor CBF/NF-Y/archaeal histone
IPR027170Transcriptional activator NFYC/HAP5 subunit
IPR009072Histone-fold

Mapman id Description
27.3.16RNA.regulation of transcription.CCAAT box binding factor family, HAP5
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT
PlantTFDBNF-YC