Gene: PP00288G00190 (Physcomitrella patens)

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Gene Identifier
PP00288G00190
Transcript Identifier
PP00288G00190.1
Gene Type
Coding gene
Location
scaffold_288 : 285730-287360 : negative

Family

Gene family
HOM03M000215
(230 genes in 16 species)
specific family
Subfamily
ORTHO03M001536
(10 genes in 9 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Negative cofactor 2 complex subunit beta
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s288_38V6.1
idPAC:18065368

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355ISOPLAZA Integrative Orthologyregulation of transcription, DNA-dependentAT5G23090 AT5G08190
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000215

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0046982IEAInterProprotein heterodimerization activity
GO:0046983IEAPLAZA Homologyprotein dimerization activityHOM03M000215

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAGenome Projectintracellular
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G23090

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003958Transcription factor CBF/NF-Y/archaeal histone
IPR009072Histone-fold

Mapman id Description
27.3.13RNA.regulation of transcription.CCAAT box binding factor family, DR1
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBCCAAT
PlantTFDBNF-YB