Gene: PP00275G00560 (Physcomitrella patens)
Overview 
- Gene Identifier
- PP00275G00560
- Transcript Identifier
- PP00275G00560.1
- Gene Type
- Coding gene
- Location
- scaffold_275 : 580736-587274 : negative
Family
- Gene family
Descriptions
- Description (AnnoMine)
-
gyrase subunit B
Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Pp1s275_106V6.1 |
id | PAC:18064311 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0006265 | IEA | Genome Project | DNA topological change |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003677 | IEA | Genome Project | DNA binding | |
GO:0003918 | IEA | Genome Project | DNA topoisomerase type II (ATP-hydrolyzing) activity | |
GO:0005524 | IEA | Genome Project | ATP binding | |
GO:0061505 | IEA | PLAZA Homology | DNA topoisomerase II activity | HOM03M003420 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005694 | IEA | Genome Project | chromosome |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
InterPro | Description |
---|---|
IPR020568 | Ribosomal protein S5 domain 2-type fold |
IPR000565 | DNA topoisomerase, type IIA, subunit B |
IPR001241 | DNA topoisomerase, type IIA |
IPR003594 | Histidine kinase-like ATPase, ATP-binding domain |
IPR013760 | DNA topoisomerase, type IIA-like domain |
IPR018522 | DNA topoisomerase, type IIA, conserved site |
IPR002288 | DNA gyrase B subunit, C-terminal |
IPR013759 | DNA topoisomerase, type IIA, central domain |
IPR011557 | DNA gyrase, subunit B |
IPR013506 | DNA topoisomerase, type IIA, subunit B, domain 2 |
IPR006171 | Toprim domain |
IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
Mapman id | Description |
---|---|
28.1 | DNA.synthesis/chromatin structure |
No SignalP domains detected for this gene.