Gene: PP00246G00290 (Physcomitrella patens)

Overview top

Gene Identifier
PP00246G00290
Transcript Identifier
PP00246G00290.1
Gene Type
Coding gene
Location
scaffold_246 : 302213-304918 : negative

Family

Gene family
HOM03M000635
(107 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine)
COBRA-like protein 5
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s246_54V6.1
idPAC:18037870

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010215IEAInterProcellulose microfibril organization
GO:0016049IEAInterProcell growth
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G60920
GO:0009825ISOPLAZA Integrative Orthologymultidimensional cell growthAT5G60920
GO:0009834ISOPLAZA Integrative Orthologysecondary cell wall biogenesisAT5G15630
GO:0030198IEAPLAZA Homologyextracellular matrix organizationHOM03M000635
GO:0071668IEAPLAZA Homologyplant-type cell wall assemblyHOM03M000635
GO:0070726IEAPLAZA Homologycell wall assemblyHOM03M000635
GO:0043062IEAPLAZA Homologyextracellular structure organizationHOM03M000635
GO:0009832IEAPLAZA Homologyplant-type cell wall biogenesisHOM03M000635

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0031225IEAInterProanchored to membrane
GO:0009930ISOPLAZA Integrative Orthologylongitudinal side of cell surfaceAT5G60920
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G60920 AT5G15630
GO:0046658ISOPLAZA Integrative Orthologyanchored to plasma membraneAT5G60920 AT3G29810
GO:0009505ISOPLAZA Integrative Orthologyplant-type cell wallAT5G60920
GO:0005774ISOPLAZA Integrative Orthologyvacuolar membraneAT5G15630
GO:0005794ISOPLAZA Integrative OrthologyGolgi apparatusAT3G29810

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006918COBRA, plant

Mapman id Description
10.2.2cell wall.cellulose synthesis.COBRA
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network