Gene: PP00188G00530 (Physcomitrella patens)

Overview top

Gene Identifier
PP00188G00530
Transcript Identifier
PP00188G00530.1
Gene Type
Coding gene
Location
scaffold_188 : 667590-671150 : positive

Family

Gene family
HOM03M000619
(110 genes in 15 species)
specific family

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Descriptions

Description (AnnoMine)
Calmodulin-binding transcription activator
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s188_92V6.1
idPAC:18072331

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0042742ISOPLAZA Integrative Orthologydefense response to bacteriumAT2G22300
GO:0010150ISOPLAZA Integrative Orthologyleaf senescenceAT2G22300
GO:0050832ISOPLAZA Integrative Orthologydefense response to fungusAT2G22300
GO:0009409ISOPLAZA Integrative Orthologyresponse to coldAT2G22300 AT5G09410 AT5G64220
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G09410
GO:0050826ISOPLAZA Integrative Orthologyresponse to freezingAT5G09410

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAGenome Projectprotein binding
GO:0003677IEAGenome ProjectDNA binding
GO:0005516IEAGenome Projectcalmodulin binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G67310

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR020683Ankyrin repeat-containing domain
IPR000048IQ motif, EF-hand binding site
IPR013783Immunoglobulin-like fold
IPR014756Immunoglobulin E-set
IPR002909IPT domain
IPR002110Ankyrin repeat
IPR027417P-loop containing nucleoside triphosphate hydrolase
IPR005559CG-1 DNA-binding domain

Mapman id Description
27.3.39RNA.regulation of transcription.AtSR Transcription Factor family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBCAMTA