Gene: PP00180G00160 (Physcomitrella patens)
Overview 
- Gene Identifier
- PP00180G00160
- Transcript Identifier
- PP00180G00160.1
- Gene Type
- Coding gene
- Location
- scaffold_180 : 201616-202020 : positive
Family
- Gene family
- Subfamily
Descriptions
No default description found ...Description of best ortholog(s):

Identifiers
Identifier | Name |
---|---|
pid | Pp1s180_31V6.2 |
id | PAC:18059664 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009648 | ISO | PLAZA Integrative Orthology | photoperiodism | AT1G17455 AT1G72630 AT2G40080 |
GO:0042753 | ISO | PLAZA Integrative Orthology | positive regulation of circadian rhythm | AT2G29950 AT2G40080 |
GO:0009909 | ISO | PLAZA Integrative Orthology | regulation of flower development | AT2G40080 |
GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT2G40080 |
GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT2G40080 |
GO:0009649 | ISO | PLAZA Integrative Orthology | entrainment of circadian clock | AT2G40080 |
GO:0048573 | ISO | PLAZA Integrative Orthology | photoperiodism, flowering | AT2G40080 |
GO:0080167 | ISO | PLAZA Integrative Orthology | response to karrikin | AT2G40080 |
GO:0048511 | IEA | PLAZA Homology | rhythmic process | HOM03M001494 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT2G40080 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G40080 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
Mapman id | Description |
---|---|
35.2 | not assigned.unknown |
No SignalP domains detected for this gene.