Gene: PP00159G00530 (Physcomitrella patens)

Overview top

Gene Identifier
PP00159G00530
Transcript Identifier
PP00159G00530.1
Gene Type
Coding gene
Location
scaffold_159 : 547405-549519 : negative

Family

Gene family
HOM03M002709
(32 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Transcription elongation factor A protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s159_110V6.1
idPAC:18049770

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006351IEAGenome Projecttranscription, DNA-templated
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT2G38560
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G38560
GO:0034243ISOPLAZA Integrative Orthologyregulation of transcription elongation from RNA polymerase II promoterAT2G38560
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT2G38560
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT2G38560
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M002709

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003676IEAGenome Projectnucleic acid binding
GO:0008270IEAGenome Projectzinc ion binding
GO:0003677IEAGenome ProjectDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003618Transcription elongation factor S-II, central domain
IPR001222Zinc finger, TFIIS-type
IPR017923Transcription factor IIS, N-terminal
IPR006289Transcription elongation factor, TFIIS
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017890Transcription elongation factor S-IIM

Mapman id Description
29.2.4protein.synthesis.elongation
No SignalP domains detected for this gene.