Gene: PP00154G00500 (Physcomitrella patens)

Overview top

Gene Identifier
PP00154G00500
Transcript Identifier
PP00154G00500.1
Gene Type
Coding gene
Location
scaffold_154 : 529279-535847 : positive

Family

Gene family
HOM03M000310
(181 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Homeobox protein knotted-1-like
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s154_83V6.1
idPAC:18067018

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT5G25220 AT5G11060
GO:0071345ISOPLAZA Integrative Orthologycellular response to cytokine stimulusAT5G25220
GO:0009722ISOPLAZA Integrative Orthologydetection of cytokinin stimulusAT5G25220
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT1G62990
GO:2000652ISOPLAZA Integrative Orthologyregulation of secondary cell wall biogenesisAT1G62990
GO:0010089ISOPLAZA Integrative Orthologyxylem developmentAT1G62990
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000310

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003677IEAGenome ProjectDNA binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G25220

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAGenome Projectnucleus
GO:0005829ISOPLAZA Integrative OrthologycytosolAT5G25220 AT5G11060

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001356Homeobox domain
IPR009057Homeodomain-like
IPR005540KNOX1
IPR005539ELK
IPR005541KNOX2
IPR008422Homeobox KN domain

Mapman id Description
27.3.22RNA.regulation of transcription.HB,Homeobox transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBHB
PlantTFDBTALE