Gene: PP00145G00370 (Physcomitrella patens)

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Gene Identifier
PP00145G00370
Transcript Identifier
PP00145G00370.1
Gene Type
Coding gene
Location
scaffold_145 : 530502-533263 : positive

Family

Gene family
HOM03M000331
(175 genes in 16 species)
specific family
Subfamily
ORTHO03M000686
(12 genes in 8 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
specific histone demethylase 1 homolog
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s145_84V6.1
idPAC:18049964

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0055114IEAGenome Projectoxidation-reduction process
GO:0051568ISOPLAZA Integrative Orthologyhistone H3-K4 methylationAT1G62830
GO:0016575ISOPLAZA Integrative Orthologyhistone deacetylationAT1G62830 AT3G10390
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT1G62830
GO:0009911ISOPLAZA Integrative Orthologypositive regulation of flower developmentAT3G10390
GO:0010228ISOPLAZA Integrative Orthologyvegetative to reproductive phase transition of meristemAT3G10390

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491IEAGenome Projectoxidoreductase activity
GO:0005515IEAGenome Projectprotein binding
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G62830

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR016040NAD(P)-binding domain
IPR009057Homeodomain-like
IPR007526SWIRM domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR002937Amine oxidase

Mapman id Description
26.7misc.oxidases - copper, flavone etc
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBSWI/SNF-SWI3