Gene: PP00107G00850 (Physcomitrella patens)

Overview top

Gene Identifier
PP00107G00850
Transcript Identifier
PP00107G00850.1
Gene Type
Coding gene
Location
scaffold_107 : 1156548-1161923 : positive

Family

Gene family
HOM03M000998
(72 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Methionine--tRNA ligase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s107_189V6.1
idPAC:18070166

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006412IEAGenome Projecttranslation
GO:0006418IEAGenome ProjecttRNA aminoacylation for protein translation
GO:0006431IEAInterPromethionyl-tRNA aminoacylation
GO:0046686ISOPLAZA Integrative Orthologyresponse to cadmium ionAT4G13780
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03M000998
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03M000998
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03M000998

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0000049IEAGenome ProjecttRNA binding
GO:0000166IEAGenome Projectnucleotide binding
GO:0004812IEAGenome Projectaminoacyl-tRNA ligase activity
GO:0005524IEAGenome ProjectATP binding
GO:0004825IEAInterPromethionine-tRNA ligase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737IEAGenome Projectcytoplasm
GO:0005829ISOPLAZA Integrative OrthologycytosolAT4G13780

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014758Methionyl-tRNA synthetase
IPR014729Rossmann-like alpha/beta/alpha sandwich fold
IPR002547tRNA-binding domain
IPR023458Methionine-tRNA ligase, type 1
IPR012340Nucleic acid-binding, OB-fold
IPR009080Aminoacyl-tRNA synthetase, class 1a, anticodon-binding
IPR015413Methionyl/Leucyl tRNA synthetase
IPR001412Aminoacyl-tRNA synthetase, class I, conserved site

Mapman id Description
29.1.10protein.aa activation.methionine-tRNA ligase
No SignalP domains detected for this gene.