Gene: PP00101G00470 (Physcomitrella patens)

Overview top

Gene Identifier
PP00101G00470
Transcript Identifier
PP00101G00470.1
Gene Type
Coding gene
Location
scaffold_101 : 412346-416717 : negative

Family

Gene family
HOM03M003314
(27 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Formamidopyrimidine-DNA glycosylase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s101_82V6.1
idPAC:18037111

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006284IEAGenome Projectbase-excision repair
GO:0006289IEAGenome Projectnucleotide-excision repair

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003684IEAGenome Projectdamaged DNA binding
GO:0003906IEAGenome ProjectDNA-(apurinic or apyrimidinic site) lyase activity
GO:0008270IEAGenome Projectzinc ion binding
GO:0016799IEAGenome Projecthydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003677IEAGenome ProjectDNA binding
GO:0003676IEAInterPronucleic acid binding
GO:0008534IEAPLAZA Homologyoxidized purine nucleobase lesion DNA N-glycosylase activityHOM03M003314
GO:0000702IEAPLAZA Homologyoxidized base lesion DNA N-glycosylase activityHOM03M003314

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012319DNA glycosylase/AP lyase, catalytic domain
IPR017956AT hook, DNA-binding motif
IPR010979Ribosomal protein S13-like, H2TH
IPR015886DNA glycosylase/AP lyase, H2TH DNA-binding
IPR020478AT hook-like

Mapman id Description
28.2DNA.repair
No SignalP domains detected for this gene.