Gene: PP00100G00890 (Physcomitrella patens)

Overview top

Gene Identifier
PP00100G00890
Transcript Identifier
PP00100G00890.1
Gene Type
Coding gene
Location
scaffold_100 : 1000898-1005839 : negative

Family

Gene family
HOM03M000562
(118 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
amylase type A isozyme
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s100_191V6.1
idPAC:18055760

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004556IEAGenome Projectalpha-amylase activity
GO:0005509IEAGenome Projectcalcium ion binding
GO:0043169IEAGenome Projectcation binding
GO:0003824IEAGenome Projectcatalytic activity
GO:0016160IEAPLAZA Homologyamylase activityHOM03M000562

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR017853Glycoside hydrolase, superfamily
IPR006047Glycosyl hydrolase, family 13, catalytic domain
IPR015902Glycoside hydrolase, family 13
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR006589Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR012850Alpha-amylase, C-terminal beta-sheet
IPR013781Glycoside hydrolase, catalytic domain

Mapman id Description
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage
No SignalP domains detected for this gene.