Gene: PP00042G00500 (Physcomitrella patens)

Overview top

Gene Identifier
PP00042G00500
Transcript Identifier
PP00042G00500.1
Gene Type
Coding gene
Location
scaffold_42 : 1159062-1165065 : positive

Family

Gene family
HOM03M000742
(94 genes in 15 species)
specific family
Subfamily
ORTHO03M025747
(2 genes in 2 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
B3 domain-containing protein Os07g0563300
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s42_132V6.1
idPAC:18047513

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT2G30470
GO:0009744ISOPLAZA Integrative Orthologyresponse to sucroseAT2G30470
GO:0045892ISOPLAZA Integrative Orthologynegative regulation of transcription, DNA-dependentAT2G30470
GO:0010030ISOPLAZA Integrative Orthologypositive regulation of seed germinationAT2G30470
GO:2000034ISOPLAZA Integrative Orthologyregulation of seed maturationAT2G30470

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0008270IEAGenome Projectzinc ion binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0003677IEAGenome ProjectDNA binding
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT2G30470

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005739ISOPLAZA Integrative OrthologymitochondrionAT2G30470
GO:0005634ISOPLAZA Integrative OrthologynucleusAT2G30470

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR003340B3 DNA binding domain
IPR011124Zinc finger, CW-type
IPR015300DNA-binding pseudobarrel domain

Mapman id Description
27.3.1RNA.regulation of transcription.ABI3/VP1-related B3-domain-containing transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlantTFDBB3