Gene: PP00022G00350 (Physcomitrella patens)

Overview top

Gene Identifier
PP00022G00350
Transcript Identifier
PP00022G00350.1
Gene Type
Coding gene
Location
scaffold_22 : 413012-417403 : positive

Family

Gene family
HOM03M001192
(61 genes in 16 species)
specific family
Subfamily
ORTHO03M014267
(3 genes in 1 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Transcription factor E2FA
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s22_60V6.1
idPAC:18042523

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0008284ISOPLAZA Integrative Orthologypositive regulation of cell proliferationAT5G22220
GO:0010090ISOPLAZA Integrative Orthologytrichome morphogenesisAT5G22220
GO:0051446ISOPLAZA Integrative Orthologypositive regulation of meiotic cell cycleAT5G22220
GO:0051302ISOPLAZA Integrative Orthologyregulation of cell divisionAT5G22220
GO:0009733ISOPLAZA Integrative Orthologyresponse to auxinAT5G22220
GO:0045893ISOPLAZA Integrative Orthologypositive regulation of transcription, DNA-dependentAT5G22220
GO:0051782ISOPLAZA Integrative Orthologynegative regulation of cell divisionAT1G47870
GO:0042023ISOPLAZA Integrative OrthologyDNA endoreduplicationAT1G47870
GO:0051301ISOPLAZA Integrative Orthologycell divisionAT1G47870
GO:0000902ISOPLAZA Integrative Orthologycell morphogenesisAT1G47870
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M001192

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0003677ISOPLAZA Integrative OrthologyDNA bindingAT5G22220 AT1G47870
GO:0005515ISOPLAZA Integrative Orthologyprotein bindingAT5G22220 AT1G47870
GO:0046982ISOPLAZA Integrative Orthologyprotein heterodimerization activityAT1G47870

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005667IEAGenome Projecttranscription factor complex
GO:0005737ISOPLAZA Integrative OrthologycytoplasmAT5G22220
GO:0005634ISOPLAZA Integrative OrthologynucleusAT5G22220 AT1G47870
GO:0005730ISOPLAZA Integrative OrthologynucleolusAT1G47870

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR015633E2F Family
IPR003316Transcription factor E2F/dimerisation partner (TDP)
IPR011991Winged helix-turn-helix DNA-binding domain

Mapman id Description
27.3.18RNA.regulation of transcription.E2F/DP transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBE2F-DP
PlantTFDBE2F/DP