Gene: PP00013G01760 (Physcomitrella patens)

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Gene Identifier
PP00013G01760
Transcript Identifier
PP00013G01760.1
Gene Type
Coding gene
Location
scaffold_13 : 2203871-2206614 : negative

Family

Gene family
HOM03M000562
(118 genes in 16 species)
specific family
Subfamily
ORTHO03M007511
(5 genes in 3 species)
specific family

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Descriptions

Description (AnnoMine)
amylase type B isozyme
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s13_335V6.1
idPAC:18064610

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0005975IEAGenome Projectcarbohydrate metabolic process
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT4G25000
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT4G25000
GO:0005983ISOPLAZA Integrative Orthologystarch catabolic processOS02G52710 OS08G36910
GO:0005987ISOPLAZA Integrative Orthologysucrose catabolic processOS02G52710 OS08G36910

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004556IEAGenome Projectalpha-amylase activity
GO:0005509IEAGenome Projectcalcium ion binding
GO:0043169IEAGenome Projectcation binding
GO:0003824IEAGenome Projectcatalytic activity
GO:0016160IEAPLAZA Homologyamylase activityHOM03M000562

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISOPLAZA Integrative Orthologyextracellular regionAT4G25000
GO:0048046ISOPLAZA Integrative OrthologyapoplastAT4G25000

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR006046Alpha amylase
IPR006047Glycosyl hydrolase, family 13, catalytic domain
IPR012850Alpha-amylase, C-terminal beta-sheet
IPR006589Glycosyl hydrolase, family 13, subfamily, catalytic domain
IPR013781Glycoside hydrolase, catalytic domain
IPR013780Glycosyl hydrolase, family 13, all-beta
IPR015902Glycoside hydrolase, family 13
IPR017853Glycoside hydrolase, superfamily

Mapman id Description
2.2.2.1major CHO metabolism.degradation.starch.starch cleavage
No SignalP domains detected for this gene.