Gene: PP00003G02010 (Physcomitrella patens)

Overview top

Gene Identifier
PP00003G02010
Transcript Identifier
PP00003G02010.1
Gene Type
Coding gene
Location
scaffold_3 : 3013424-3015677 : negative

Family

Gene family
HOM03M002692
(32 genes in 16 species)
specific family

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Descriptions

Description (AnnoMine)
Tryptophan synthase beta chain
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s3_514V6.2
idPAC:18062475

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0008152IEAGenome Projectmetabolic process
GO:0000162IEAInterProtryptophan biosynthetic process
GO:0006568IEAInterProtryptophan metabolic process
GO:0006979ISOPLAZA Integrative Orthologyresponse to oxidative stressAT5G54810
GO:0009684ISOPLAZA Integrative Orthologyindoleacetic acid biosynthetic processAT5G54810
GO:0009651ISOPLAZA Integrative Orthologyresponse to salt stressAT5G54810
GO:0046219IEAPLAZA Homologyindolalkylamine biosynthetic processHOM03M002692
GO:0006586IEAPLAZA Homologyindolalkylamine metabolic processHOM03M002692

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003824IEAGenome Projectcatalytic activity
GO:0030170IEAGenome Projectpyridoxal phosphate binding
GO:0004834IEAInterProtryptophan synthase activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT5G54810
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT5G54810 AT4G27070
GO:0009507ISOPLAZA Integrative OrthologychloroplastAT5G54810 AT4G27070
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT4G27070

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR023026Tryptophan synthase beta chain/beta chain-like
IPR006654Tryptophan synthase, beta chain
IPR006653Tryptophan synthase, beta chain, conserved site
IPR001926Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily

Mapman id Description
13.1.6.5.5amino acid metabolism.synthesis.aromatic aa.tryptophan.tryptophan synthase
No SignalP domains detected for this gene.