Gene: PP00003G01150 (Physcomitrella patens)

Overview top

Gene Identifier
PP00003G01150
Transcript Identifier
PP00003G01150.1
Gene Type
Coding gene
Location
scaffold_3 : 1979357-1980772 : negative

Family

Gene family
HOM03M000160
(302 genes in 16 species)
specific family
Duplication type
Block duplicate

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Descriptions

Description (AnnoMine)
Putative GATA transcription factor 22
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
pidPp1s3_329V6.1
idPAC:18062528

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAGenome Projectregulation of transcription, DNA-dependent
GO:0010468ISOPLAZA Integrative Orthologyregulation of gene expressionAT4G26150
GO:0010380ISOPLAZA Integrative Orthologyregulation of chlorophyll biosynthetic processAT4G26150
GO:0010187ISOPLAZA Integrative Orthologynegative regulation of seed germinationAT4G26150
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT4G26150
GO:0009740ISOPLAZA Integrative Orthologygibberellic acid mediated signaling pathwayAT4G26150
GO:0009416ISOPLAZA Integrative Orthologyresponse to light stimulusAT4G26150
GO:0007623ISOPLAZA Integrative Orthologycircadian rhythmAT4G26150
GO:0009735ISOPLAZA Integrative Orthologyresponse to cytokininAT4G26150
GO:0010467IEAPLAZA Homologygene expressionHOM03M000160
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03M000160
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03M000160
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03M000160
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03M000160
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03M000160
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03M000160
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03M000160
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03M000160
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03M000160
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03M000160
GO:0065007IEAPLAZA Homologybiological regulationHOM03M000160
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03M000160
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03M000160
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03M000160
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M000160
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03M000160
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03M000160
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03M000160
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03M000160
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03M000160
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03M000160
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03M000160
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03M000160

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700IEAGenome Projectsequence-specific DNA binding transcription factor activity
GO:0008270IEAGenome Projectzinc ion binding
GO:0043565IEAGenome Projectsequence-specific DNA binding
GO:0044212ISOPLAZA Integrative Orthologytranscription regulatory region DNA bindingAT4G26150
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03M000160
GO:0003677IEAPLAZA HomologyDNA bindingHOM03M000160
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03M000160

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR000679Zinc finger, GATA-type
IPR013088Zinc finger, NHR/GATA-type

Mapman id Description
27.3.9RNA.regulation of transcription.C2C2(Zn) GATA transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-GATA
PlantTFDBGATA