Gene: OSINDICA_11G23450 (Oryza sativa ssp. indica)
Overview 
- Gene Identifier
- OSINDICA_11G23450
- Transcript Identifier
- OSINDICA_11G23450.1
- Gene Type
- Coding gene
- Location
- Chr11 : 15700984-15706470 : negative
Family
- Gene family
Descriptions
- Description
-
Auxin response factor 23
- Description (AnnoMine)
-
Auxin response factor
Identifiers
Identifier | Name |
---|---|
name | OsIFCC035359 |
uniprot | A2ZET6 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0009734 | IEA | UniProt | auxin mediated signaling pathway | 1 2 |
GO:0006355 | IEA | UniProt | regulation of transcription, DNA-dependent | 1 2 |
GO:0006351 | IEA | UniProt | transcription, DNA-templated | 1 2 |
GO:0009725 | IEA | InterPro | response to hormone | |
GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-dependent | AT5G62000 |
GO:0009911 | ISO | PLAZA Integrative Orthology | positive regulation of flower development | AT5G62000 |
GO:0010047 | ISO | PLAZA Integrative Orthology | fruit dehiscence | AT5G62000 |
GO:0010150 | ISO | PLAZA Integrative Orthology | leaf senescence | AT5G62000 |
GO:0010227 | ISO | PLAZA Integrative Orthology | floral organ abscission | AT5G62000 |
GO:0008285 | ISO | PLAZA Integrative Orthology | negative regulation of cell proliferation | AT5G62000 |
GO:0048481 | ISO | PLAZA Integrative Orthology | ovule development | AT5G62000 |
GO:0009737 | ISO | PLAZA Integrative Orthology | response to abscisic acid | AT5G62000 |
GO:0010468 | IEA | PLAZA Homology | regulation of gene expression | HOM03M000112 |
GO:0010467 | IEA | PLAZA Homology | gene expression | HOM03M000112 |
GO:0006807 | IEA | PLAZA Homology | nitrogen compound metabolic process | HOM03M000112 |
GO:0051252 | IEA | PLAZA Homology | regulation of RNA metabolic process | HOM03M000112 |
GO:0051171 | IEA | PLAZA Homology | regulation of nitrogen compound metabolic process | HOM03M000112 |
GO:0019222 | IEA | PLAZA Homology | regulation of metabolic process | HOM03M000112 |
GO:0042221 | IEA | PLAZA Homology | response to chemical | HOM03M000112 |
GO:0019219 | IEA | PLAZA Homology | regulation of nucleobase-containing compound metabolic process | HOM03M000112 |
GO:0034641 | IEA | PLAZA Homology | cellular nitrogen compound metabolic process | HOM03M000112 |
GO:0034645 | IEA | PLAZA Homology | cellular macromolecule biosynthetic process | HOM03M000112 |
GO:0050789 | IEA | PLAZA Homology | regulation of biological process | HOM03M000112 |
GO:0009889 | IEA | PLAZA Homology | regulation of biosynthetic process | HOM03M000112 |
GO:0018130 | IEA | PLAZA Homology | heterocycle biosynthetic process | HOM03M000112 |
GO:0019438 | IEA | PLAZA Homology | aromatic compound biosynthetic process | HOM03M000112 |
GO:0046483 | IEA | PLAZA Homology | heterocycle metabolic process | HOM03M000112 |
GO:0016070 | IEA | PLAZA Homology | RNA metabolic process | HOM03M000112 |
GO:0044271 | IEA | PLAZA Homology | cellular nitrogen compound biosynthetic process | HOM03M000112 |
GO:0065007 | IEA | PLAZA Homology | biological regulation | HOM03M000112 |
GO:0010556 | IEA | PLAZA Homology | regulation of macromolecule biosynthetic process | HOM03M000112 |
GO:0006139 | IEA | PLAZA Homology | nucleobase-containing compound metabolic process | HOM03M000112 |
GO:0032774 | IEA | PLAZA Homology | RNA biosynthetic process | HOM03M000112 |
GO:0009719 | IEA | PLAZA Homology | response to endogenous stimulus | HOM03M000112 |
GO:0006725 | IEA | PLAZA Homology | cellular aromatic compound metabolic process | HOM03M000112 |
GO:1901576 | IEA | PLAZA Homology | organic substance biosynthetic process | HOM03M000112 |
GO:0090304 | IEA | PLAZA Homology | nucleic acid metabolic process | HOM03M000112 |
GO:0080090 | IEA | PLAZA Homology | regulation of primary metabolic process | HOM03M000112 |
GO:2001141 | IEA | PLAZA Homology | regulation of RNA biosynthetic process | HOM03M000112 |
GO:0010033 | IEA | PLAZA Homology | response to organic substance | HOM03M000112 |
GO:0009058 | IEA | PLAZA Homology | biosynthetic process | HOM03M000112 |
GO:0009059 | IEA | PLAZA Homology | macromolecule biosynthetic process | HOM03M000112 |
GO:0060255 | IEA | PLAZA Homology | regulation of macromolecule metabolic process | HOM03M000112 |
GO:2000112 | IEA | PLAZA Homology | regulation of cellular macromolecule biosynthetic process | HOM03M000112 |
GO:0031323 | IEA | PLAZA Homology | regulation of cellular metabolic process | HOM03M000112 |
GO:0031326 | IEA | PLAZA Homology | regulation of cellular biosynthetic process | HOM03M000112 |
GO:1901360 | IEA | PLAZA Homology | organic cyclic compound metabolic process | HOM03M000112 |
GO:1901362 | IEA | PLAZA Homology | organic cyclic compound biosynthetic process | HOM03M000112 |
GO:0034654 | IEA | PLAZA Homology | nucleobase-containing compound biosynthetic process | HOM03M000112 |
GO:0050794 | IEA | PLAZA Homology | regulation of cellular process | HOM03M000112 |
GO:0044249 | IEA | PLAZA Homology | cellular biosynthetic process | HOM03M000112 |
GO:0050896 | IEA | PLAZA Homology | response to stimulus | HOM03M000112 |
Molecular Function
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0003677 | IEA | UniProt | DNA binding | 1 2 |
GO:0046983 | IEA | InterPro | protein dimerization activity | |
GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G62000 |
GO:0043565 | ISO | PLAZA Integrative Orthology | sequence-specific DNA binding | AT5G62000 |
GO:0003676 | IEA | PLAZA Homology | nucleic acid binding | HOM03M000112 |
Cellular Component
GO term | Evidence(s) | Provider | Description | Source |
---|---|---|---|---|
GO:0005634 | IEA | UniProt | nucleus | 1 2 |
GO:0043231 | IEA | PLAZA Homology | intracellular membrane-bounded organelle | HOM03M000112 |
GO:0043226 | IEA | PLAZA Homology | organelle | HOM03M000112 |
GO:0043227 | IEA | PLAZA Homology | membrane-bounded organelle | HOM03M000112 |
GO:0043229 | IEA | PLAZA Homology | intracellular organelle | HOM03M000112 |
Color Legend
Experimental Evidence |
Electronic Evidence |
Computational Reviewed Evidence |
No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
Database | Type |
---|---|
PlnTFDB | ARF |