Gene: OSINDICA_08G42340 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_08G42340
Transcript Identifier
OSINDICA_08G42340.1
Gene Type
Coding gene
Location
Chr08 : 29422339-29424035 : negative

Family

Gene family
HOM03M002154
(39 genes in 16 species)
specific family
Subfamily
ORTHO03M007702
(5 genes in 5 species)
specific family
Duplication type
Tandem duplicate   and   Block duplicate

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Descriptions

Description (AnnoMine)
ATPase regulatory subunit 3 homolog A
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC027534

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0042176IEAInterProregulation of protein catabolic process
GO:0030163ISOPLAZA Integrative Orthologyprotein catabolic processAT1G75990
GO:0006511ISOPLAZA Integrative Orthologyubiquitin-dependent protein catabolic processAT1G75990

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0030234IEAInterProenzyme regulator activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000502IEAInterProproteasome complex
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G75990
GO:0016020ISOPLAZA Integrative OrthologymembraneAT1G75990
GO:0005886ISOPLAZA Integrative Orthologyplasma membraneAT1G75990

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR01358626S proteasome regulatory subunit, C-terminal
IPR000717Proteasome component (PCI) domain
IPR011991Winged helix-turn-helix DNA-binding domain
IPR013143PCI/PINT associated module

No MapMan annotations defined for this gene.
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network