Gene: OSINDICA_06G13160 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_06G13160
Transcript Identifier
OSINDICA_06G13160.1
Gene Type
Coding gene
Location
Chr06 : 8581643-8593584 : positive

Family

Gene family
HOM03M001299
(58 genes in 16 species)
specific family

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Descriptions

Description
Probable alanine--tRNA ligase, chloroplastic
Description (AnnoMine)
Alanine--tRNA ligase

Identifiers

Identifier Name
nameOsIFCC010057
uniprotB8B4H5

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006419IEAUniProtalanyl-tRNA aminoacylation1
GO:0009793IEAUniProtembryo development ending in seed dormancy1
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0043039IEAInterProtRNA aminoacylation

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004813IEAUniProtalanine-tRNA ligase activity1
GO:0005524IEAUniProtATP binding1
GO:0000049IEAUniProttRNA binding1
GO:0008270IEAUniProtzinc ion binding1
GO:0003700IEAInterProsequence-specific DNA binding transcription factor activity
GO:0000166IEAInterPronucleotide binding
GO:0003676IEAInterPronucleic acid binding
GO:0016876IEAInterProligase activity, forming aminoacyl-tRNA and related compounds

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009570IEAUniProtchloroplast stroma1
GO:0016020IEAUniProtmembrane1
GO:0005739IEAUniProtmitochondrion1
GO:0005667IEAInterProtranscription factor complex
GO:0005737IEAInterProcytoplasm
GO:0009507IEAInterProchloroplast

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012947Threonyl/alanyl tRNA synthetase, SAD
IPR002318Alanine-tRNA ligase, class IIc
IPR011991Winged helix-turn-helix DNA-binding domain
IPR003156Phosphoesterase, DHHA1
IPR003316Transcription factor E2F/dimerisation partner (TDP)
IPR023033Alanine-tRNA ligase, eukaryota/bacteria
IPR018163Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain
IPR027522Probable alanine--tRNA ligase, plants
IPR018165Alanyl-tRNA synthetase, class IIc, core domain
IPR018164Alanyl-tRNA synthetase, class IIc, N-terminal
IPR009000Translation protein, beta-barrel domain
IPR018162Alanine-tRNA ligase, class IIc, anti-codon-binding domain

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBE2F-DP