Gene: OSINDICA_05G38200 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_05G38200
Transcript Identifier
OSINDICA_05G38200.1
Gene Type
Coding gene
Location
Chr05 : 26401256-26406532 : negative

Family

Gene family
HOM03M007362
(13 genes in 13 species)
specific family

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Descriptions

Description (AnnoMine)
Lipid-A-disaccharide synthase
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC021733

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006260IEAInterProDNA replication
GO:0009245IEAInterProlipid A biosynthetic process
GO:0008610IEAInterProlipid biosynthetic process
GO:0046493IEAPLAZA Homologylipid A metabolic processHOM03M007362
GO:1901269IEAPLAZA Homologylipooligosaccharide metabolic processHOM03M007362
GO:1901271IEAPLAZA Homologylipooligosaccharide biosynthetic processHOM03M007362

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008408IEAInterPro3'-5' exonuclease activity
GO:0004523IEAInterProribonuclease H activity
GO:0003887IEAInterProDNA-directed DNA polymerase activity
GO:0008915IEAInterProlipid-A-disaccharide synthase activity
GO:0008780IEAInterProacyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
GO:0003824IEAInterProcatalytic activity
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding
GO:0016740IEAInterProtransferase activity

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR022898Ribonuclease HII
IPR003835Glycosyl transferase, family 19
IPR018357Hexapeptide transferase, conserved site
IPR001451Bacterial transferase hexapeptide repeat
IPR010137Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
IPR012337Ribonuclease H-like domain
IPR004805DNA polymerase III, alpha subunit
IPR024567Ribonuclease HII/HIII domain
IPR016195Polymerase/histidinol phosphatase-like
IPR004013PHP, C-terminal
IPR003141Polymerase/histidinol phosphatase, N-terminal
IPR011708Bacterial DNA polymerase III, alpha subunit
IPR013114Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ
IPR011004Trimeric LpxA-like

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.