Gene: OSINDICA_05G00420 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_05G00420
Transcript Identifier
OSINDICA_05G00420.1
Gene Type
Coding gene
Location
Chr05 : 244923-255487 : negative

Family

Gene family
HOM03M003405
(26 genes in 14 species)
specific family

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Descriptions

Description (AnnoMine)
STIP1 homology and U box-containing protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC019382

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0016567IEAInterProprotein ubiquitination
GO:0009058IEAInterProbiosynthetic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005515IEAInterProprotein binding
GO:0004842IEAInterProubiquitin-protein ligase activity
GO:0030170IEAInterPropyridoxal phosphate binding
GO:0008168IEAInterPromethyltransferase activity
GO:0003824IEAInterProcatalytic activity

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0000151IEAInterProubiquitin ligase complex

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013026Tetratricopeptide repeat-containing domain
IPR015422Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR019734Tetratricopeptide repeat
IPR025779Methionine S-methyltransferase
IPR003613U box domain
IPR015424Pyridoxal phosphate-dependent transferase
IPR015421Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR004839Aminotransferase, class I/classII
IPR011990Tetratricopeptide-like helical
IPR013083Zinc finger, RING/FYVE/PHD-type

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.