Gene: OSINDICA_03G57400 (Oryza sativa ssp. indica)

Overview top

Gene Identifier
OSINDICA_03G57400
Transcript Identifier
OSINDICA_03G57400.1
Gene Type
Coding gene
Location
Chr03 : 38536967-38539412 : negative

Family

Gene family
HOM03M002709
(32 genes in 16 species)
specific family
Subfamily
ORTHO03M004457
(7 genes in 6 species)
specific family
Duplication type
Block duplicate

Loading...please wait

Descriptions

Description (AnnoMine)
Transcription elongation factor A protein 1
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC008741

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355IEAInterProregulation of transcription, DNA-dependent
GO:0006351IEAInterProtranscription, DNA-templated
GO:0009845ISOPLAZA Integrative Orthologyseed germinationAT2G38560
GO:0009739ISOPLAZA Integrative Orthologyresponse to gibberellin stimulusAT2G38560
GO:0034243ISOPLAZA Integrative Orthologyregulation of transcription elongation from RNA polymerase II promoterAT2G38560
GO:0010162ISOPLAZA Integrative Orthologyseed dormancy processAT2G38560
GO:0009910ISOPLAZA Integrative Orthologynegative regulation of flower developmentAT2G38560
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03M002709

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0003677IEAInterProDNA binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEAInterPronucleus

Color Legend

Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR003618Transcription elongation factor S-II, central domain
IPR001222Zinc finger, TFIIS-type
IPR017923Transcription factor IIS, N-terminal
IPR006289Transcription elongation factor, TFIIS
IPR003617Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
IPR017890Transcription elongation factor S-IIM

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.