Gene: OSINDICA_03G55400 (Oryza sativa ssp. indica)

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Gene Identifier
OSINDICA_03G55400
Transcript Identifier
OSINDICA_03G55400.1
Gene Type
Coding gene
Location
Chr03 : 37322748-37333132 : positive

Family

Gene family
HOM03M001027
(71 genes in 16 species)
specific family
Subfamily
ORTHO03M003161
(8 genes in 8 species)
specific family

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Descriptions

Description (AnnoMine)
5'-3' exoribonuclease
Only text-mined description found ...
Description of best ortholog(s):

Identifiers

Identifier Name
nameOsIFCC008578

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010587ISOPLAZA Integrative OrthologymiRNA catabolic processAT1G54490
GO:0040029ISOPLAZA Integrative Orthologyregulation of gene expression, epigeneticAT1G54490
GO:0031087ISOPLAZA Integrative Orthologydeadenylation-independent decapping of nuclear-transcribed mRNAAT1G54490
GO:0000291ISOPLAZA Integrative Orthologynuclear-transcribed mRNA catabolic process, exonucleolyticAT1G54490
GO:0009826ISOPLAZA Integrative Orthologyunidimensional cell growthAT1G54490
GO:0009961ISOPLAZA Integrative Orthologyresponse to 1-aminocyclopropane-1-carboxylic acidAT1G54490
GO:0009873ISOPLAZA Integrative Orthologyethylene mediated signaling pathwayAT1G54490
GO:0009723ISOPLAZA Integrative Orthologyresponse to ethyleneAT1G54490
GO:0009630ISOPLAZA Integrative OrthologygravitropismAT1G54490

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004527IEAInterProexonuclease activity
GO:0008270IEAInterProzinc ion binding
GO:0003676IEAInterPronucleic acid binding
GO:0004534ISOPLAZA Integrative Orthology5'-3' exoribonuclease activityAT1G54490

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005622IEAInterProintracellular
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G54490
GO:0005634ISOPLAZA Integrative OrthologynucleusAT1G54490

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Experimental Evidence
Electronic Evidence
Computational Reviewed Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR004859Putative 5-3 exonuclease
IPR001878Zinc finger, CCHC-type
IPR0270735'-3' exoribonuclease

No MapMan annotations defined for this gene.
No SignalP domains detected for this gene.